Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015925126.1_cds_XP_016473395.1_65529
CDS Infomation

[gene=LOC107795302] [db_xref=GeneID:107795302] [protein=putative cyclic nucleotide-gated ion channel 15] [protein_id=XP_016473395.1] [location=complement(join(3055..3582,3972..4208,4318..4429,4504..4796,5022..5234,5484..6030,6430..6476))] [gbkey=CDS]
Sequence

ATGTTTAGCCAGAGCACCATGTCTTCTACTAAACAAAAATCTGTCAGATTTCCAAATGAC
ATTGACATTGCAATATCTGGATCATACAAGCCGGAAAAATTCCTTAAATCTATATCTATG
AAGAATGACGAACAAACGTCTAGCTCAAAGTTGGAGAAGGCAGAAATAGAGCCAAAAATG
AAGATGTTCCGAAAGAAAAAGCTTTCAAGAGTATTTTCAGAAGACTATGAGGGGGTTCAA
ATGAAGATATTAGATCCTCGCGGACGTCCCATAAACACATGGAACAAGTGTTTCTTAATT
GCTTGTCTTACATCTCTATTTGTTGATCCACTCTTCTTCTATTTACCAAGTGTTAACGAC
GAAATCTGCATGGATGCAAGTTATCCTATGGAGATAATCCTTACAATCGTCCGATCAGTG
ATAGATGCATTTTATTCGGTTGAGATTTTAGTTCAGTTTCGAACAGCTTATGTTGCACCT
TCCTCTCGCGTTTTTGGACGAGGAGAGCTAGTCATTGATTCTTCAAAGATTGCATCGAGA
TATCTCCGTAAGGATTTTTGGCTTGATCTCTTGGCTACTCTTCCTCTTCCTCAGGTTTTG
ATTTGGGCTGCAATCCCATCTTTGAGAGGTTCGAATAGGATTGGTGCAAAACACGCCTTG
CGCTTTACTATCATTTCTCAGTTTCTGTTGAGGCTATGCCTTATTTTTCCACTTTCATCT
CACATTATCAAGACTACTGGTGTAATGGTGGAAGCTGCATGGGCGGGGGCGGTTTATAAC
CTTGTGCTCTTCATGCTCGCAAGTCATGTTATGGGTTCTTGCTGGTACCTTTTTGCTGTG
GAACGACAAGAACAGTGTTGGAAAAAGGTTTGTGATCAACAACAACCGCATTGCCAGGAT
TGGTATTTTGACTGTCATAGGAGGGATTTTACTAGTAGAATCGCCTGGTATGAACGGAGC
AATATATCTACATTATGCGGTCCTAGCAGCGACTTCTTCCAATTCGGAATCTTTAATGAT
GCACTGACTTTTAGAGTTACACAGTCATCATTCTTGAACAAGTATGCTTACTGTTTTTGG
TGGGGTTTGAGGAACCTAAGCTCTCTTGGGCAGAATCTTGTGACTACTACTGACATTAAT
GAAATTAATTTTGCTGTTGTTCTTGCAATTCTGGGATTATTGCTCTTTGCTTTACTTATT
GGGAATATGCAGACTTTCCTTCAATCAACTACTATGAGACTTGAAGAATGGAGGATCAAA
AGGACAGATACAGAAGAATGGATGCATCATCGCCAACTCCCCCACAATCTTAAGGAAAGG
GTGCGAAAATATGATCTATATAGGTGGGTGACAACTCGAGGTGTTGATGAAGAAGCCATT
GTCAAAAGCCTTCCGGTGGATCTCCGAAGGGACATCAAGTGTCATCTTTGTCTTGATCTA
GTTCGTCGAGTACCTCTATTTGATCAAATGGATGAGTGTATCTTGGATGCAATATGTGAA
AGGTTGAAACCACTTCTATATACTGCAGGAACATGCCTTGTTCGCGAAGCTGATCCTGTG
AACGAAATGGACTTCATTATAAGAGGCCATTTGGATTCTTACACTACTGATGGAGGGAGA
ACAGGTTTTTTCAATTCATGTCAACTAGGTCCGTGTGATTTCTGTGGTGAAGAACTACTG
ACATGGGCGTTAGACCCTCGTCCGAGCATCATCCTCCCGTCCTCTACACGTACAGTGACA
GCGATCACTGAAGTAGAAGTATTTGCACTCACTGCAGAGGATGTAAAATATGTGGCATCA
CAGTTCAGGAAGCTGCATAGCAAGCAACTCAGGCATACGTTCAGGTTTTACTCGAACCAA
TGGAGGACTTGGGCTGCATGTTTCATACAAGCAGCGTGGTTTCGCTACAAGAGGAGGAAA
GAGGCTTCTCTACTTAAAGTATTAGTCTTACTACTCCAATACAATTTGGTAAGCTAA

Peptide Sequence

PEP ID

XP_016473395.1
PEP Infomation

PREDICTED: putative cyclic nucleotide-gated ion channel 15 [Nicotiana tabacum]
Sequence

MFSQSTMSSTKQKSVRFPNDIDIAISGSYKPEKFLKSISMKNDEQTSSSKLEKAEIEPKM
KMFRKKKLSRVFSEDYEGVQMKILDPRGRPINTWNKCFLIACLTSLFVDPLFFYLPSVND
EICMDASYPMEIILTIVRSVIDAFYSVEILVQFRTAYVAPSSRVFGRGELVIDSSKIASR
YLRKDFWLDLLATLPLPQVLIWAAIPSLRGSNRIGAKHALRFTIISQFLLRLCLIFPLSS
HIIKTTGVMVEAAWAGAVYNLVLFMLASHVMGSCWYLFAVERQEQCWKKVCDQQQPHCQD
WYFDCHRRDFTSRIAWYERSNISTLCGPSSDFFQFGIFNDALTFRVTQSSFLNKYAYCFW
WGLRNLSSLGQNLVTTTDINEINFAVVLAILGLLLFALLIGNMQTFLQSTTMRLEEWRIK
RTDTEEWMHHRQLPHNLKERVRKYDLYRWVTTRGVDEEAIVKSLPVDLRRDIKCHLCLDL
VRRVPLFDQMDECILDAICERLKPLLYTAGTCLVREADPVNEMDFIIRGHLDSYTTDGGR
TGFFNSCQLGPCDFCGEELLTWALDPRPSIILPSSTRTVTAITEVEVFALTAEDVKYVAS
QFRKLHSKQLRHTFRFYSNQWRTWAACFIQAAWFRYKRRKEASLLKVLVLLLQYNLVS

Transcript Sequence

Gene sequence data has not been registered.